ch.epfl.biop.imaris

Class SpotsDetector.SpotsDetectorBuilder

java.lang.Object

ch.epfl.biop.imaris.SpotsDetector.SpotsDetectorBuilder

Enclosing class:

SpotsDetector

public static final class SpotsDetector.SpotsDetectorBuilder
extends Object

Method Summary

Modifier and Type	Method and Description
static SpotsDetector.SpotsDetectorBuilder	aSpotsDetector(int channelIndex)
SpotsDetector	build()
SpotsDetector.SpotsDetectorBuilder	createRegionsChannel()
SpotsDetector.SpotsDetectorBuilder	enableRegionsThresholdAutomatic()
SpotsDetector.SpotsDetectorBuilder	isRegionsFromLocalContrast(Boolean aRegionsFromLocalContrast)
SpotsDetector.SpotsDetectorBuilder	isRegionsSpotsDiameterFromVolume(Boolean flag)
SpotsDetector.SpotsDetectorBuilder	isSubtractBackground(Boolean aSubtractBackground)
SpotsDetector.SpotsDetectorBuilder	setColor(Integer[] color)
SpotsDetector.SpotsDetectorBuilder	setDataSet(Imaris.IDataSetPrx aDataSet)
SpotsDetector.SpotsDetectorBuilder	setDiameter(double diameter)
SpotsDetector.SpotsDetectorBuilder	setFilter(String aFiltersString)
SpotsDetector.SpotsDetectorBuilder	setName(String name)
SpotsDetector.SpotsDetectorBuilder	setRegionsThresholdManual(double threshold)
SpotsDetector.SpotsDetectorBuilder	setROI(int[][] aRegionsOfInterest)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Method Detail

aSpotsDetector

public static SpotsDetector.SpotsDetectorBuilder aSpotsDetector(int channelIndex)
                                                         throws Imaris.Error

Throws:

Imaris.Error

setDataSet

public SpotsDetector.SpotsDetectorBuilder setDataSet(Imaris.IDataSetPrx aDataSet)

setROI

public SpotsDetector.SpotsDetectorBuilder setROI(int[][] aRegionsOfInterest)

setColor

public SpotsDetector.SpotsDetectorBuilder setColor(Integer[] color)

setName

public SpotsDetector.SpotsDetectorBuilder setName(String name)

setDiameter

public SpotsDetector.SpotsDetectorBuilder setDiameter(double diameter)

isSubtractBackground

public SpotsDetector.SpotsDetectorBuilder isSubtractBackground(Boolean aSubtractBackground)

setFilter

public SpotsDetector.SpotsDetectorBuilder setFilter(String aFiltersString)

isRegionsFromLocalContrast

public SpotsDetector.SpotsDetectorBuilder isRegionsFromLocalContrast(Boolean aRegionsFromLocalContrast)

enableRegionsThresholdAutomatic

public SpotsDetector.SpotsDetectorBuilder enableRegionsThresholdAutomatic()

setRegionsThresholdManual

public SpotsDetector.SpotsDetectorBuilder setRegionsThresholdManual(double threshold)

createRegionsChannel

public SpotsDetector.SpotsDetectorBuilder createRegionsChannel()

isRegionsSpotsDiameterFromVolume

public SpotsDetector.SpotsDetectorBuilder isRegionsSpotsDiameterFromVolume(Boolean flag)

build

public SpotsDetector build()